Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00466.1 | AKJ01876.1 | AA314_02092 | AA314_03502 | RTX toxin. | Membrane protein. | 0.494 |
AKJ00466.1 | AKJ02846.1 | AA314_02092 | AA314_04472 | RTX toxin. | Flagellar motor protein. | 0.774 |
AKJ00466.1 | AKJ04380.1 | AA314_02092 | AA314_06006 | RTX toxin. | Hypothetical protein. | 0.773 |
AKJ00466.1 | AKJ06333.1 | AA314_02092 | AA314_07959 | RTX toxin. | Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2. | 0.411 |
AKJ00466.1 | AKJ06738.1 | AA314_02092 | AA314_08364 | RTX toxin. | Hypothetical protein. | 0.771 |
AKJ00466.1 | AKJ07382.1 | AA314_02092 | AA314_09008 | RTX toxin. | Exonuclease SbcC. | 0.786 |
AKJ00466.1 | AKJ07983.1 | AA314_02092 | AA314_09609 | RTX toxin. | Hypothetical protein. | 0.760 |
AKJ01875.1 | AKJ01876.1 | AA314_03501 | AA314_03502 | Hydrolase, CocE/NonD family. | Membrane protein. | 0.578 |
AKJ01876.1 | AKJ00466.1 | AA314_03502 | AA314_02092 | Membrane protein. | RTX toxin. | 0.494 |
AKJ01876.1 | AKJ01875.1 | AA314_03502 | AA314_03501 | Membrane protein. | Hydrolase, CocE/NonD family. | 0.578 |
AKJ01876.1 | AKJ02193.1 | AA314_03502 | AA314_03819 | Membrane protein. | Putative membrane protein. | 0.534 |
AKJ01876.1 | AKJ02846.1 | AA314_03502 | AA314_04472 | Membrane protein. | Flagellar motor protein. | 0.569 |
AKJ01876.1 | AKJ04380.1 | AA314_03502 | AA314_06006 | Membrane protein. | Hypothetical protein. | 0.569 |
AKJ01876.1 | AKJ06333.1 | AA314_03502 | AA314_07959 | Membrane protein. | Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2. | 0.509 |
AKJ01876.1 | AKJ06738.1 | AA314_03502 | AA314_08364 | Membrane protein. | Hypothetical protein. | 0.513 |
AKJ01876.1 | AKJ07382.1 | AA314_03502 | AA314_09008 | Membrane protein. | Exonuclease SbcC. | 0.493 |
AKJ01876.1 | AKJ07908.1 | AA314_03502 | AA314_09534 | Membrane protein. | Putative integral membrane protein. | 0.657 |
AKJ01876.1 | AKJ07983.1 | AA314_03502 | AA314_09609 | Membrane protein. | Hypothetical protein. | 0.501 |
AKJ02193.1 | AKJ01876.1 | AA314_03819 | AA314_03502 | Putative membrane protein. | Membrane protein. | 0.534 |
AKJ02193.1 | AKJ02846.1 | AA314_03819 | AA314_04472 | Putative membrane protein. | Flagellar motor protein. | 0.583 |
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