Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ01878.1Polymyxin resistance protein ArnC. (247 aa)    
Predicted Functional Partners:
AKJ01877.1
Hypothetical protein.
  
  
 0.795
AKJ01596.1
Dolichol-phosphate mannosyltransferase.
 
     0.734
AKJ04216.1
Glycosyl transferase family 2.
  
     0.670
AKJ01911.1
Glycosyl transferase, group 2 family protein.
  
     0.666
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.647
AKJ00487.1
Glycosyl transferase, family 2.
 
     0.592
AKJ07191.1
Glycosyl transferase, group 2 family protein.
  
     0.580
AKJ01879.1
Hypothetical protein.
       0.557
AKJ01880.1
Hypothetical protein.
       0.497
AKJ02718.1
Teichoic acid export ATP-binding protein TagH.
 
  
 0.484
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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