STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01880.1Hypothetical protein. (313 aa)    
Predicted Functional Partners:
AKJ02656.1
Response regulator.
  
 0.978
AKJ05845.1
EAL domain protein.
 
 
 0.978
AKJ04601.1
Response regulator.
  
 0.972
AKJ06267.1
HAMP domain/HD domain protein.
 
   
 0.966
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.808
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.793
AKJ07938.1
Hypothetical protein.
  
     0.774
AKI99665.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.768
AKI99496.1
PAS/PAC domain protein.
 
 
 0.742
AKJ03002.1
Circadian input kinase A.
 
 0.685
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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