STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01904.1Response regulator/GGDEF domain protein. (312 aa)    
Predicted Functional Partners:
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.808
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.793
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
     
 0.780
AKJ06668.1
Response regulator/GGDEF domain protein.
  
     0.708
AKI99496.1
PAS/PAC domain protein.
  
 
 0.698
pyrH
Uridine monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
   0.675
AKI98556.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.634
AKJ00035.1
Hypothetical protein.
  
 
 0.634
AKJ03002.1
Circadian input kinase A.
  
 
 0.634
AKJ04058.1
Two-component sensor histidine kinase.
  
 
 0.634
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (22%) [HD]