STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01906.1Phosphohistidine phosphatase SixA. (169 aa)    
Predicted Functional Partners:
AKJ01905.1
Frataxin like protein CyaY; Belongs to the frataxin family.
       0.689
AKJ01261.1
Polyhydroxyalkanoic acid synthase.
  
     0.603
AKI99796.1
Polyhydroxyalkanoic acid synthase.
  
     0.529
AKJ05323.1
Polyhydroxyalkanoic acid synthase.
  
     0.476
AKJ01907.1
Putative lipoprotein.
       0.475
AKJ02411.1
Sporulation domain protein.
  
     0.452
AKJ05115.1
Putative hydrolase.
  
     0.443
AKJ01931.1
TPR domain protein, putative component of TonB system.
  
     0.429
AKJ05033.1
AglU.
  
     0.417
AKJ05504.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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