STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01921.1Hypothetical protein. (906 aa)    
Predicted Functional Partners:
AKJ03564.1
Putative secreted protein.
  
     0.770
AKJ08091.1
Membrane protein.
  
     0.742
AKJ07865.1
Endonuclease/exonuclease/phosphatase family protein.
  
   
 0.733
AKJ02786.1
Isochorismatase.
  
    0.709
AKJ02076.1
Putative immunogloblin.
 
     0.694
AKJ07977.1
Hypothetical protein.
  
     0.693
AKJ02213.1
Peptidase, S41 family.
  
     0.677
AKJ00837.1
Peptidase, M19 family.
  
     0.662
AKI99649.1
Transcriptional regulator, TetR family.
  
     0.656
AKJ03762.1
Hypothetical protein.
  
     0.655
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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