STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctaBHeme O synthase, protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (295 aa)    
Predicted Functional Partners:
AKI99917.1
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA.
 0.998
AKJ07156.1
Cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.966
AKI98759.1
Cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.960
AKJ07157.1
Cytochrome c oxidase polypeptide III.
 
  
 0.957
AKI98758.1
Cytochrome c oxidase polypeptide III.
 
  
 0.955
AKI98760.1
Cytochrome c oxidase polypeptide II.
 
  
 0.947
AKJ07155.1
Cytochrome c oxidase polypeptide II.
 
  
 0.947
hemH
Ferrochelatase, protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.924
AKJ01520.1
Heme oxygenase.
     
 0.904
AKJ00439.1
Bacteriophytochrome heme oxygenase BphO.
     
  0.900
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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