STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01961.1HEAT repeat protein. (328 aa)    
Predicted Functional Partners:
AKJ01962.1
Hypothetical protein.
 
     0.808
AKI99964.1
HEAT repeat protein.
  
     0.772
AKJ04016.1
Hypothetical protein.
  
     0.772
AKJ05213.1
HEAT repeat protein.
  
     0.758
AKJ07382.1
Exonuclease SbcC.
  
     0.751
AKJ01149.1
HEAT repeat protein.
  
     0.738
AKJ06930.1
Hypothetical protein.
  
     0.738
AKJ02846.1
Flagellar motor protein.
  
     0.734
AKJ03082.1
Hypothetical protein.
  
     0.725
AKJ04524.1
Hypothetical protein.
  
     0.720
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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