STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01966.1Cell division protein FtsK. (659 aa)    
Predicted Functional Partners:
AKJ00859.1
Alpha,alpha-trehalose-phosphate synthase.
   
    0.559
AKJ01967.1
3-hydroxyisobutyrate dehydrogenase.
       0.516
AKJ01965.1
Ribosomal subunit interface protein.
  
    0.513
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
    0.480
AKJ05737.1
Topoisomerase IV subunit A.
  
    0.480
AKJ02898.1
Hypothetical protein.
   
    0.470
AKJ05041.1
Hypothetical protein.
   
    0.470
AKJ07347.1
Hypothetical protein.
   
    0.470
AKJ01498.1
Glycine-rich cell wall structural protein.
   
  
 0.413
AKJ01499.1
Hypothetical protein.
   
  
 0.413
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.