STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01983.1Multimodular transpeptidase-transglycosylase. (862 aa)    
Predicted Functional Partners:
AKJ06061.1
Multimodular transpeptidase-transglycosylase.
  
  
0.933
AKJ06928.1
Multimodular transpeptidase-transglycosylase.
  
  
 
0.918
AKJ00164.1
D-alanyl-D-alanine carboxypeptidase.
     
  0.900
AKJ01980.1
Nitrogen regulation protein ntrY.
       0.778
AKJ01981.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
       0.773
AKJ01982.1
FG-GAP repeat protein.
       0.773
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
   
 0.679
AKJ06383.1
Cell division protein FtsW; Belongs to the SEDS family.
  
   
 0.679
AKJ05490.1
Cell division protein FtsI.
 
 
 
 0.663
mrdB
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
   
 0.662
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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