STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01988.1Putative cholesterol oxidase. (545 aa)    
Predicted Functional Partners:
AKJ01989.1
Glycerophosphoryl diester phosphodiesterase.
     
 0.606
AKJ01990.1
Hypothetical protein.
       0.594
AKJ03970.1
Cholesterol oxidase.
     0.530
AKJ01754.1
Cholesterol oxidase.
   
 0.497
AKJ01987.1
Acyl-CoA dehydrogenase.
   
   0.468
AKJ01991.1
Alkaline serine exoprotease A precursor; Belongs to the peptidase S8 family.
 
    0.462
AKJ06159.1
Transcriptional regulator, TetR family.
  
  
 0.430
AKJ07120.1
MutT/NUDIX family protein.
  
 
  0.422
AKJ06702.1
Arsenical pump-driving ATPase.
  
     0.421
AKJ06586.1
Hypothetical protein.
  
 
  0.412
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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