Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKJ01998.1 | AKJ01999.1 | AA314_03624 | AA314_03625 | Inosine-5'-monophosphate dehydrogenase. | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.649 |
| AKJ01999.1 | AKJ01998.1 | AA314_03625 | AA314_03624 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Inosine-5'-monophosphate dehydrogenase. | 0.649 |
| AKJ01999.1 | AKJ02135.1 | AA314_03625 | AA314_03761 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein. | 0.673 |
| AKJ01999.1 | AKJ05517.1 | AA314_03625 | AA314_07143 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | CarD-like transcriptional regulator. | 0.633 |
| AKJ01999.1 | dnaG | AA314_03625 | AA314_03572 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.734 |
| AKJ01999.1 | nusA | AA314_03625 | AA314_07888 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | 0.844 |
| AKJ01999.1 | rlmE | AA314_03625 | AA314_06695 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.622 |
| AKJ01999.1 | rpoA | AA314_03625 | AA314_04757 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.869 |
| AKJ01999.1 | rpoB | AA314_03625 | AA314_06550 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.856 |
| AKJ01999.1 | rpoC | AA314_03625 | AA314_06549 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.770 |
| AKJ01999.1 | rpoZ | AA314_03625 | AA314_03953 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.901 |
| AKJ02135.1 | AKJ01999.1 | AA314_03761 | AA314_03625 | Hypothetical protein. | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.673 |
| AKJ02135.1 | AKJ05517.1 | AA314_03761 | AA314_07143 | Hypothetical protein. | CarD-like transcriptional regulator. | 0.506 |
| AKJ02135.1 | nusA | AA314_03761 | AA314_07888 | Hypothetical protein. | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | 0.468 |
| AKJ05517.1 | AKJ01999.1 | AA314_07143 | AA314_03625 | CarD-like transcriptional regulator. | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.633 |
| AKJ05517.1 | AKJ02135.1 | AA314_07143 | AA314_03761 | CarD-like transcriptional regulator. | Hypothetical protein. | 0.506 |
| AKJ05517.1 | nusA | AA314_07143 | AA314_07888 | CarD-like transcriptional regulator. | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | 0.403 |
| AKJ05517.1 | rpoA | AA314_07143 | AA314_04757 | CarD-like transcriptional regulator. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.823 |
| AKJ05517.1 | rpoB | AA314_07143 | AA314_06550 | CarD-like transcriptional regulator. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.856 |
| AKJ05517.1 | rpoC | AA314_07143 | AA314_06549 | CarD-like transcriptional regulator. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.806 |
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