Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKJ02047.1Aminopeptidase. (584 aa)    
Predicted Functional Partners:
AKJ07120.1
MutT/NUDIX family protein.
  
   0.592
AKI99087.1
2OG-Fe(II) oxygenase family enzyme.
  
     0.574
AKJ02048.1
Enoyl-CoA hydratase.
   
   0.566
AKJ07838.1
Nudix hydrolase 3.
  
   0.539
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
 
    
 0.537
AKJ03184.1
Chitinase.
  
     0.499
AKJ01122.1
Alg9 family protein mannosyltransferase.
  
     0.493
AKJ03292.1
Hypothetical protein.
  
     0.471
AKJ00177.1
Malate permease.
 
     0.455
AKI99654.1
Chitinase.
  
     0.447
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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