Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02059.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
AKJ02678.1
Hypothetical protein.
     
  0.900
AKJ02684.1
Flp pilus assembly protein RcpC/CpaB.
  
  
 0.843
AKJ04907.1
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family.
  
  
 0.687
AKJ02685.1
Flp pilus assembly protein TadB.
  
  
 0.624
AKJ02686.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
  
  
 0.594
AKI98994.1
Hypothetical protein.
  
  
 0.550
AKJ00966.1
Hypothetical protein.
  
  
 0.550
AKI99534.1
Hypothetical protein.
  
  
 0.505
AKJ01223.1
Hypothetical protein.
  
  
 0.505
AKJ02681.1
Pilus biogenesis protein, TadE family.
  
  
 0.505
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.