STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02097.1High-affnity carbon uptake protein Hat/HatR. (666 aa)    
Predicted Functional Partners:
AKJ02098.1
High-affnity carbon uptake protein Hat/HatR.
 
     0.926
AKJ02904.1
Hypothetical protein.
 
     0.774
AKJ02884.1
Hypothetical protein.
  
     0.773
AKJ02891.1
NHL repeat domain protein.
  
     0.773
AKJ08141.1
Putative O-linked GlcNAc transferase-putative TPR-containing transmembrane protein.
  
     0.761
AKJ02371.1
Putative secreted sugar hydrolase.
  
     0.755
AKJ02900.1
Phage tail sheath protein FI.
 
     0.747
AKJ00154.1
Hypothetical protein.
  
     0.741
AKJ00831.1
Chitinase.
  
     0.740
AKJ02898.1
Hypothetical protein.
  
     0.732
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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