STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02128.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
AKJ02130.1
TonB-dependent receptor.
 
     0.731
AKI99270.1
Peptidase C14 caspase catalytic subunit p20.
  
     0.626
AKJ04299.1
TPR domain protein, putative component of TonB system.
  
 
   0.579
AKJ01577.1
TPR domain protein, putative component of TonB system.
  
    0.569
AKJ03860.1
Dihydroneopterin aldolase.
  
    0.566
AKJ02158.1
DifB protein.
  
     0.552
AKJ04966.1
Lanthionine biosynthesis protein LanB.
  
     0.506
AKJ02404.1
TPR domain protein, putative component of TonB system.
  
    0.497
AKI99794.1
Peptidyl-prolyl cis-trans isomerase PpiD.
 
 
 0.466
AKJ02510.1
Oligo alginate lyase.
  
     0.446
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.