Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ02128.1 | AKJ02130.1 | AA314_03754 | AA314_03756 | Hypothetical protein. | TonB-dependent receptor. | 0.731 |
AKJ02128.1 | AKJ08151.1 | AA314_03754 | AA314_09777 | Hypothetical protein. | TonB family protein. | 0.401 |
AKJ02130.1 | AKJ02128.1 | AA314_03756 | AA314_03754 | TonB-dependent receptor. | Hypothetical protein. | 0.731 |
AKJ02130.1 | AKJ06010.1 | AA314_03756 | AA314_07636 | TonB-dependent receptor. | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | 0.661 |
AKJ02130.1 | AKJ06332.1 | AA314_03756 | AA314_07958 | TonB-dependent receptor. | TonB family protein. | 0.648 |
AKJ02130.1 | AKJ07517.1 | AA314_03756 | AA314_09143 | TonB-dependent receptor. | MotA/TolQ/ExbB proton channel family protein. | 0.648 |
AKJ02130.1 | AKJ07518.1 | AA314_03756 | AA314_09144 | TonB-dependent receptor. | Biopolymer transport protein ExbD/TolR. | 0.641 |
AKJ02130.1 | AKJ07519.1 | AA314_03756 | AA314_09145 | TonB-dependent receptor. | Ferric siderophore transport system, periplasmic binding protein TonB. | 0.803 |
AKJ02130.1 | AKJ07614.1 | AA314_03756 | AA314_09240 | TonB-dependent receptor. | Vitamin B12 ABC transporter, ATPase component BtuD. | 0.630 |
AKJ02130.1 | AKJ07624.1 | AA314_03756 | AA314_09250 | TonB-dependent receptor. | Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.673 |
AKJ02130.1 | AKJ08151.1 | AA314_03756 | AA314_09777 | TonB-dependent receptor. | TonB family protein. | 0.594 |
AKJ02130.1 | AKJ08425.1 | AA314_03756 | AA314_10051 | TonB-dependent receptor. | Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.627 |
AKJ06010.1 | AKJ02130.1 | AA314_07636 | AA314_03756 | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | TonB-dependent receptor. | 0.661 |
AKJ06010.1 | AKJ06332.1 | AA314_07636 | AA314_07958 | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | TonB family protein. | 0.859 |
AKJ06010.1 | AKJ07517.1 | AA314_07636 | AA314_09143 | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | MotA/TolQ/ExbB proton channel family protein. | 0.654 |
AKJ06010.1 | AKJ07518.1 | AA314_07636 | AA314_09144 | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | Biopolymer transport protein ExbD/TolR. | 0.662 |
AKJ06010.1 | AKJ07519.1 | AA314_07636 | AA314_09145 | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | Ferric siderophore transport system, periplasmic binding protein TonB. | 0.736 |
AKJ06010.1 | AKJ07614.1 | AA314_07636 | AA314_09240 | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | Vitamin B12 ABC transporter, ATPase component BtuD. | 0.627 |
AKJ06010.1 | AKJ07624.1 | AA314_07636 | AA314_09250 | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.469 |
AKJ06010.1 | AKJ08151.1 | AA314_07636 | AA314_09777 | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | TonB family protein. | 0.912 |
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