Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00307.1 | AKJ02174.1 | AA314_01933 | AA314_03800 | NiFe hydrogenase nickel incorporation protein HypA. | Rubredoxin. | 0.431 |
AKJ01167.1 | AKJ02174.1 | AA314_02793 | AA314_03800 | Beta-lactamase domain protein. | Rubredoxin. | 0.433 |
AKJ01485.1 | AKJ02174.1 | AA314_03111 | AA314_03800 | Alkyl hydroperoxide reductase protein C. | Rubredoxin. | 0.601 |
AKJ01485.1 | fur | AA314_03111 | AA314_05269 | Alkyl hydroperoxide reductase protein C. | Ferric uptake regulation protein FUR; Belongs to the Fur family. | 0.773 |
AKJ01485.1 | fur-2 | AA314_03111 | AA314_09771 | Alkyl hydroperoxide reductase protein C. | Zinc uptake regulation protein ZUR; Belongs to the Fur family. | 0.680 |
AKJ02171.1 | AKJ02172.1 | AA314_03797 | AA314_03798 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.552 |
AKJ02171.1 | AKJ02173.1 | AA314_03797 | AA314_03799 | Hypothetical protein. | Hypothetical protein. | 0.437 |
AKJ02171.1 | AKJ02174.1 | AA314_03797 | AA314_03800 | Hypothetical protein. | Rubredoxin. | 0.420 |
AKJ02172.1 | AKJ02171.1 | AA314_03798 | AA314_03797 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.552 |
AKJ02172.1 | AKJ02173.1 | AA314_03798 | AA314_03799 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.580 |
AKJ02172.1 | AKJ02174.1 | AA314_03798 | AA314_03800 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Rubredoxin. | 0.572 |
AKJ02173.1 | AKJ02171.1 | AA314_03799 | AA314_03797 | Hypothetical protein. | Hypothetical protein. | 0.437 |
AKJ02173.1 | AKJ02172.1 | AA314_03799 | AA314_03798 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.580 |
AKJ02173.1 | AKJ02174.1 | AA314_03799 | AA314_03800 | Hypothetical protein. | Rubredoxin. | 0.762 |
AKJ02174.1 | AKJ00307.1 | AA314_03800 | AA314_01933 | Rubredoxin. | NiFe hydrogenase nickel incorporation protein HypA. | 0.431 |
AKJ02174.1 | AKJ01167.1 | AA314_03800 | AA314_02793 | Rubredoxin. | Beta-lactamase domain protein. | 0.433 |
AKJ02174.1 | AKJ01485.1 | AA314_03800 | AA314_03111 | Rubredoxin. | Alkyl hydroperoxide reductase protein C. | 0.601 |
AKJ02174.1 | AKJ02171.1 | AA314_03800 | AA314_03797 | Rubredoxin. | Hypothetical protein. | 0.420 |
AKJ02174.1 | AKJ02172.1 | AA314_03800 | AA314_03798 | Rubredoxin. | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.572 |
AKJ02174.1 | AKJ02173.1 | AA314_03800 | AA314_03799 | Rubredoxin. | Hypothetical protein. | 0.762 |
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