STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02192.1Hypothetical protein. (400 aa)    
Predicted Functional Partners:
AKJ07515.1
Microbial collagenase, secreted.
  
     0.742
AKJ07049.1
Hypothetical protein.
  
     0.737
AKJ06280.1
Signal recognition particle receptor protein FtsY.
  
 
 0.736
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.730
AKI99740.1
Hypothetical protein.
  
     0.723
AKJ04091.1
Protein ImpG/VasA.
  
     0.720
AKJ04095.1
Hypothetical protein.
  
     0.718
AKJ02333.1
Peptidase C14, caspase catalytic subunit p20.
  
     0.707
AKJ03516.1
Hypothetical protein.
  
     0.677
AKJ04965.1
Lanthionine biosynthesis cyclase LanC.
  
     0.660
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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