Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00767.1 | AKJ00771.1 | AA314_02393 | AA314_02397 | Iron-sulfur cluster assembly protein SufB. | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | 0.977 |
AKJ00767.1 | AKJ02198.1 | AA314_02393 | AA314_03824 | Iron-sulfur cluster assembly protein SufB. | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | 0.877 |
AKJ00767.1 | AKJ02199.1 | AA314_02393 | AA314_03825 | Iron-sulfur cluster assembly protein SufB. | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.755 |
AKJ00771.1 | AKJ00767.1 | AA314_02397 | AA314_02393 | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | Iron-sulfur cluster assembly protein SufB. | 0.977 |
AKJ00771.1 | AKJ00822.1 | AA314_02397 | AA314_02448 | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | Ferredoxin, 2Fe-2S. | 0.841 |
AKJ00771.1 | AKJ01532.1 | AA314_02397 | AA314_03158 | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | Cysteine desulfurase. | 0.915 |
AKJ00771.1 | AKJ02195.1 | AA314_02397 | AA314_03821 | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | Ferredoxin, 2Fe-2S. | 0.841 |
AKJ00771.1 | AKJ02198.1 | AA314_02397 | AA314_03824 | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | 0.814 |
AKJ00771.1 | AKJ05058.1 | AA314_02397 | AA314_06684 | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | Cysteine desulfurase. | 0.915 |
AKJ00771.1 | hscA | AA314_02397 | AA314_03822 | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.654 |
AKJ00771.1 | hscB | AA314_02397 | AA314_03823 | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | Chaperone protein HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.955 |
AKJ00771.1 | iscS | AA314_02397 | AA314_03826 | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.915 |
AKJ00822.1 | AKJ00771.1 | AA314_02448 | AA314_02397 | Ferredoxin, 2Fe-2S. | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | 0.841 |
AKJ00822.1 | AKJ01532.1 | AA314_02448 | AA314_03158 | Ferredoxin, 2Fe-2S. | Cysteine desulfurase. | 0.787 |
AKJ00822.1 | AKJ02198.1 | AA314_02448 | AA314_03824 | Ferredoxin, 2Fe-2S. | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | 0.809 |
AKJ00822.1 | AKJ02199.1 | AA314_02448 | AA314_03825 | Ferredoxin, 2Fe-2S. | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.841 |
AKJ00822.1 | AKJ05058.1 | AA314_02448 | AA314_06684 | Ferredoxin, 2Fe-2S. | Cysteine desulfurase. | 0.792 |
AKJ00822.1 | hscA | AA314_02448 | AA314_03822 | Ferredoxin, 2Fe-2S. | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.554 |
AKJ00822.1 | hscB | AA314_02448 | AA314_03823 | Ferredoxin, 2Fe-2S. | Chaperone protein HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.800 |
AKJ00822.1 | iscS | AA314_02448 | AA314_03826 | Ferredoxin, 2Fe-2S. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.783 |
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