STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02241.1IcmF-related protein. (420 aa)    
Predicted Functional Partners:
AKJ02242.1
Hypothetical protein.
 
 
 0.965
AKJ02240.1
Hypothetical protein.
 
  
 0.960
AKJ02243.1
Hypothetical protein.
 
  
 0.940
AKJ00072.1
Hypothetical protein.
 
  
 0.916
AKJ02237.1
Hypothetical protein.
 
  
 0.914
AKJ02238.1
Hypothetical protein.
 
  
 0.906
AKJ02236.1
Putative cytoplasmic protein USSDB7A.
 
  
 0.889
AKJ04097.1
Hypothetical protein.
 
  
 0.870
AKJ06815.1
Hypothetical protein.
 
  
 0.870
AKJ02234.1
Protein ImpG/VasA.
 
  
 0.869
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.