STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02253.1Response regulator receiver domain protein. (381 aa)    
Predicted Functional Partners:
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
 
 
 0.646
AKJ02254.1
Hypothetical protein.
       0.628
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
 
 
 0.617
AKJ00035.1
Hypothetical protein.
 
 
 0.605
AKI99496.1
PAS/PAC domain protein.
  
 
 0.548
AKJ01326.1
Signal transduction histidine kinase.
  
 
 0.511
AKI99519.1
Sensory box histidine kinase.
  
 
 0.500
AKJ00608.1
Sensor histidine kinase.
  
 
 0.478
AKJ06706.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.476
AKJ06718.1
Sensory box histidine kinase.
  
 
 0.476
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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