STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02273.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
AKJ02274.1
Alcohol dehydrogenase GroES domain protein.
  
   0.785
AKJ08440.1
Hypothetical protein.
  
   0.584
AKI98965.1
Tryptophan synthase alpha chain.
  
     0.569
AKJ01666.1
Hypothetical protein.
 
     0.568
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.556
AKJ02484.1
Transcriptional regulator, MarR family.
  
     0.556
AKJ00021.1
Fatty acid desaturase family protein.
  
    0.540
AKJ02276.1
Hypothetical protein.
       0.539
AKJ02941.1
Beta-hydroxyacid dehydrogenase.
  
    0.519
AKI98968.1
Hypothetical protein.
  
     0.515
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.