STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02279.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
AKJ02280.1
Hypothetical protein.
      0.976
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
   0.779
AKJ02848.1
DNA-binding response regulator KdpE.
  
 
   0.778
AKJ06613.1
Hypothetical protein.
  
     0.774
AKJ04329.1
Hypothetical protein.
  
    0.773
AKJ06647.1
Hypothetical protein.
  
     0.772
AKJ01583.1
Gliding motility protein MglA.
  
     0.771
AKJ04420.1
Hypothetical protein.
  
     0.767
AKJ06643.1
TPR domain protein, putative.
  
   
 0.757
AKJ06003.1
Hypothetical protein.
  
     0.756
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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