STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02280.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
AKJ02279.1
Hypothetical protein.
      0.976
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
   0.779
AKJ02278.1
Periplasmic thiol:disulfide interchange protein DsbA.
       0.752
AKJ01144.1
Chaperone protein HtpG.
  
 0.668
AKJ05633.1
Putative heat shock protein, hsp90-family.
  
 0.668
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
  
 0.668
AKJ07296.1
Hypothetical protein.
  
 0.668
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
   
 
 0.628
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
   
 
 0.628
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
   
 
 0.628
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.