STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02292.1Radical SAM domain heme biosynthesis protein. (238 aa)    
Predicted Functional Partners:
AKJ02291.1
Hypothetical protein; Belongs to the UPF0276 family.
  
  
 0.901
AKI98938.1
Hypothetical protein.
  
  
 0.580
AKI99272.1
Hypothetical protein.
  
  
 0.580
AKJ02226.1
Hypothetical protein.
  
  
 0.580
AKJ04436.1
Hypothetical protein.
  
  
 0.580
AKJ02290.1
Hypothetical protein.
       0.524
AKJ01479.1
Hypothetical protein.
  
  
 0.511
AKJ03628.1
Membrane protein.
  
  
 0.511
AKJ04623.1
Hypothetical protein.
  
  
 0.511
AKJ06757.1
Hypothetical protein.
  
  
 0.511
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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