STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02311.1TPR repeat protein. (276 aa)    
Predicted Functional Partners:
AKJ08293.1
TPR repeat protein.
  
     0.761
AKJ02312.1
Magnesium and cobalt efflux protein CorC.
       0.723
AKJ02628.1
TPR domain protein, putative component of TonB system.
  
     0.711
AKJ00320.1
TPR repeat protein.
  
     0.710
AKJ01931.1
TPR domain protein, putative component of TonB system.
 
     0.677
AKJ01603.1
TolA protein.
  
     0.676
AKJ02837.1
TPR domain protein, putative component of TonB system.
 
     0.658
AKJ02715.1
TolA protein.
 
     0.622
AKJ02813.1
Tetratricopeptide repeat domain protein.
 
     0.618
AKJ00862.1
Cell division protein FtsK.
  
     0.603
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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