STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02338.1Hypothetical protein. (244 aa)    
Predicted Functional Partners:
AKJ02337.1
Hypothetical protein.
 
     0.953
AKJ06874.1
Hypothetical protein.
 
     0.803
AKJ07948.1
Putative lipoprotein.
  
     0.623
AKI98631.1
1,4-alpha-glucan branching enzyme.
  
     0.554
AKJ06148.1
Putative lipoprotein.
  
     0.497
AKJ02336.1
Hypothetical protein.
       0.487
AKJ07226.1
Hypothetical protein.
  
     0.468
AKJ02339.1
Hypothetical protein.
       0.455
AKJ00370.1
Hypothetical protein.
  
     0.439
AKJ00469.1
Hypothetical protein.
  
     0.426
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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