STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02350.1N-formylglutamate deformylase. (305 aa)    
Predicted Functional Partners:
AKJ08051.1
Putative ribosylglycohydrolase.
  
     0.567
AKJ06105.1
RNA:NAD 2'-phosphotransferase.
 
   
 0.558
AKJ06575.1
Hypothetical protein.
  
    0.548
AKJ07001.1
tRNAHis-5'-guanylyltransferase.
  
     0.543
AKJ02351.1
Pentapeptide repeat family protein.
       0.535
AKJ04984.1
Hypothetical protein.
 
     0.526
AKJ01850.1
Beta-glucosidase.
 
     0.518
AKJ06226.1
Endo-1,4-beta-xylanase A precursor.
  
     0.514
AKJ00486.1
Nitrogen regulatory protein P-II.
   
 
 0.496
AKJ04477.1
Adenylate cyclase.
 
     0.484
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.