Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02368.1Beta-lactamase. (512 aa)    
Predicted Functional Partners:
AKJ02367.1
Transcriptional regulator, AraC family.
       0.526
AKI99284.1
Hypothetical protein.
  
     0.510
AKJ03012.1
Histone acetyltransferase HPA2.
 
     0.503
AKJ03769.1
Hypothetical protein.
  
     0.473
AKJ03500.1
Hypothetical protein.
  
     0.461
AKJ00681.1
cAMP-binding protein.
  
    0.440
AKJ00680.1
cAMP-binding protein.
  
    0.431
AKJ02369.1
Membrane protein.
       0.431
AKJ01764.1
Acyltransferase family protein.
  
     0.426
AKI99453.1
Hypothetical protein.
  
     0.422
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.