STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02369.1Membrane protein. (323 aa)    
Predicted Functional Partners:
AKJ01921.1
Hypothetical protein.
  
     0.585
AKI98422.1
Putative metal-dependent membrane protease.
  
    0.483
AKI99634.1
CAAX amino terminal protease family protein.
  
    0.483
AKJ03085.1
CAAX amino terminal protease family protein.
  
    0.483
AKJ05260.1
CAAX amino terminal protease family protein.
  
    0.483
AKJ06896.1
Abortive infection protein.
  
    0.483
AKJ07121.1
Abortive infection protein.
  
    0.483
AKJ04996.1
Outer membrane receptor protein, mostly Fe transport.
 
  
 0.443
AKJ02368.1
Beta-lactamase.
       0.431
AKJ06010.1
Nicel/Cobalt-specific TonB-dependent outer membrane receptor.
 
  
 0.431
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.