Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02385.1Ribonuclease I precursor; Belongs to the RNase T2 family. (281 aa)    
Predicted Functional Partners:
AKI98708.1
Putative inner membrane protein.
  
     0.543
rpmG
LSU ribosomal protein L33p; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.518
rpmH
LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.
    
   0.513
rplU
LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
    
   0.513
rpmA
LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family.
    
   0.513
rplM
LSU ribosomal protein L13p; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
    
   0.513
rpsI
SSU ribosomal protein S9p; Belongs to the universal ribosomal protein uS9 family.
    
   0.513
rpsU
SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family.
    
   0.513
rplI
LSU ribosomal protein L9p; Binds to the 23S rRNA.
    
   0.513
rpsR
SSU ribosomal protein S18p; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
    
   0.513
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.