Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ02393.1 | AKJ02394.1 | AA314_04019 | AA314_04020 | Peptidase M20:Peptidase dimerization. | Putative lipoprotein. | 0.714 |
AKJ02393.1 | AKJ02395.1 | AA314_04019 | AA314_04021 | Peptidase M20:Peptidase dimerization. | Mucin 2 precursor. | 0.714 |
AKJ02393.1 | AKJ02396.1 | AA314_04019 | AA314_04022 | Peptidase M20:Peptidase dimerization. | Gliding motility protein GldF. | 0.714 |
AKJ02393.1 | AKJ02397.1 | AA314_04019 | AA314_04023 | Peptidase M20:Peptidase dimerization. | ATP-binding protein of ABC transporter. | 0.603 |
AKJ02393.1 | AKJ02399.1 | AA314_04019 | AA314_04025 | Peptidase M20:Peptidase dimerization. | Adenylate cyclase. | 0.479 |
AKJ02393.1 | AKJ06219.1 | AA314_04019 | AA314_07845 | Peptidase M20:Peptidase dimerization. | Metallo-beta-lactamase precursor. | 0.568 |
AKJ02393.1 | AKJ07408.1 | AA314_04019 | AA314_09034 | Peptidase M20:Peptidase dimerization. | Hypothetical protein. | 0.511 |
AKJ02393.1 | atpA | AA314_04019 | AA314_09803 | Peptidase M20:Peptidase dimerization. | ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.470 |
AKJ02393.1 | atpH | AA314_04019 | AA314_09801 | Peptidase M20:Peptidase dimerization. | ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.465 |
AKJ02393.1 | prfB | AA314_04019 | AA314_04202 | Peptidase M20:Peptidase dimerization. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.483 |
AKJ02394.1 | AKJ02393.1 | AA314_04020 | AA314_04019 | Putative lipoprotein. | Peptidase M20:Peptidase dimerization. | 0.714 |
AKJ02394.1 | AKJ02395.1 | AA314_04020 | AA314_04021 | Putative lipoprotein. | Mucin 2 precursor. | 0.949 |
AKJ02394.1 | AKJ02396.1 | AA314_04020 | AA314_04022 | Putative lipoprotein. | Gliding motility protein GldF. | 0.924 |
AKJ02394.1 | AKJ02397.1 | AA314_04020 | AA314_04023 | Putative lipoprotein. | ATP-binding protein of ABC transporter. | 0.807 |
AKJ02394.1 | AKJ02399.1 | AA314_04020 | AA314_04025 | Putative lipoprotein. | Adenylate cyclase. | 0.407 |
AKJ02395.1 | AKJ02393.1 | AA314_04021 | AA314_04019 | Mucin 2 precursor. | Peptidase M20:Peptidase dimerization. | 0.714 |
AKJ02395.1 | AKJ02394.1 | AA314_04021 | AA314_04020 | Mucin 2 precursor. | Putative lipoprotein. | 0.949 |
AKJ02395.1 | AKJ02396.1 | AA314_04021 | AA314_04022 | Mucin 2 precursor. | Gliding motility protein GldF. | 0.958 |
AKJ02395.1 | AKJ02397.1 | AA314_04021 | AA314_04023 | Mucin 2 precursor. | ATP-binding protein of ABC transporter. | 0.924 |
AKJ02395.1 | AKJ02399.1 | AA314_04021 | AA314_04025 | Mucin 2 precursor. | Adenylate cyclase. | 0.407 |
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