STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02396.1Gliding motility protein GldF. (264 aa)    
Predicted Functional Partners:
AKJ02395.1
Mucin 2 precursor.
 
  
 0.957
AKJ02397.1
ATP-binding protein of ABC transporter.
 
 
 0.947
AKJ02394.1
Putative lipoprotein.
 
     0.924
AKJ03921.1
ABC-type multidrug transport system, ATPase component.
 
 
 0.856
AKJ07364.1
ABC transporter, ATP-binding protein.
 
 
 0.856
AKJ01445.1
ABC transporter, ATP-binding protein.
 
 
 0.855
AKJ03918.1
Gliding motility protein GldG.
  
 0.815
AKJ07362.1
Hypothetical protein.
 
  
 0.771
AKJ02393.1
Peptidase M20:Peptidase dimerization.
       0.714
AKJ07499.1
ABC transporter, ATP-binding protein.
 
 
 0.623
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.