STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02397.1ATP-binding protein of ABC transporter. (243 aa)    
Predicted Functional Partners:
AKJ02396.1
Gliding motility protein GldF.
 
 
 0.952
AKJ02395.1
Mucin 2 precursor.
 
   
 0.924
AKJ03919.1
Gliding motility protein GldF.
 
 
 0.871
AKJ07363.1
Putative membrane spanning protein.
 
 0.870
AKJ02394.1
Putative lipoprotein.
 
     0.807
AKJ03918.1
Gliding motility protein GldG.
 
   
 0.791
AKJ07362.1
Hypothetical protein.
 
   
 0.661
AKJ02393.1
Peptidase M20:Peptidase dimerization.
       0.603
AKJ02398.1
Aspartokinase; Belongs to the aspartokinase family.
       0.501
AKI98409.1
Membrane protein.
  
 
 0.474
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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