Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00779.1 | AKJ02295.1 | AA314_02405 | AA314_03921 | Cell division protein FtsK. | Peptidase C14 caspase catalytic subunit p20. | 0.582 |
AKJ00779.1 | AKJ02402.1 | AA314_02405 | AA314_04028 | Cell division protein FtsK. | Helicase loader DnaI. | 0.557 |
AKJ00779.1 | AKJ02404.1 | AA314_02405 | AA314_04030 | Cell division protein FtsK. | TPR domain protein, putative component of TonB system. | 0.777 |
AKJ00779.1 | AKJ02407.1 | AA314_02405 | AA314_04033 | Cell division protein FtsK. | FHA domain containing protein. | 0.739 |
AKJ00779.1 | AKJ04299.1 | AA314_02405 | AA314_05925 | Cell division protein FtsK. | TPR domain protein, putative component of TonB system. | 0.764 |
AKJ00779.1 | AKJ05033.1 | AA314_02405 | AA314_06659 | Cell division protein FtsK. | AglU. | 0.776 |
AKJ00779.1 | AKJ06641.1 | AA314_02405 | AA314_08267 | Cell division protein FtsK. | Hypothetical protein. | 0.769 |
AKJ02141.1 | AKJ02402.1 | AA314_03767 | AA314_04028 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Helicase loader DnaI. | 0.958 |
AKJ02141.1 | dnaA | AA314_03767 | AA314_00456 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.936 |
AKJ02295.1 | AKJ00779.1 | AA314_03921 | AA314_02405 | Peptidase C14 caspase catalytic subunit p20. | Cell division protein FtsK. | 0.582 |
AKJ02295.1 | AKJ02402.1 | AA314_03921 | AA314_04028 | Peptidase C14 caspase catalytic subunit p20. | Helicase loader DnaI. | 0.625 |
AKJ02295.1 | AKJ02404.1 | AA314_03921 | AA314_04030 | Peptidase C14 caspase catalytic subunit p20. | TPR domain protein, putative component of TonB system. | 0.667 |
AKJ02295.1 | AKJ05033.1 | AA314_03921 | AA314_06659 | Peptidase C14 caspase catalytic subunit p20. | AglU. | 0.543 |
AKJ02295.1 | AKJ06641.1 | AA314_03921 | AA314_08267 | Peptidase C14 caspase catalytic subunit p20. | Hypothetical protein. | 0.595 |
AKJ02402.1 | AKJ00779.1 | AA314_04028 | AA314_02405 | Helicase loader DnaI. | Cell division protein FtsK. | 0.557 |
AKJ02402.1 | AKJ02141.1 | AA314_04028 | AA314_03767 | Helicase loader DnaI. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.958 |
AKJ02402.1 | AKJ02295.1 | AA314_04028 | AA314_03921 | Helicase loader DnaI. | Peptidase C14 caspase catalytic subunit p20. | 0.625 |
AKJ02402.1 | AKJ02403.1 | AA314_04028 | AA314_04029 | Helicase loader DnaI. | Hypothetical protein. | 0.738 |
AKJ02402.1 | AKJ02404.1 | AA314_04028 | AA314_04030 | Helicase loader DnaI. | TPR domain protein, putative component of TonB system. | 0.710 |
AKJ02402.1 | AKJ02407.1 | AA314_04028 | AA314_04033 | Helicase loader DnaI. | FHA domain containing protein. | 0.509 |
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