STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02404.1TPR domain protein, putative component of TonB system. (1197 aa)    
Predicted Functional Partners:
AKJ02407.1
FHA domain containing protein.
 
  
 0.868
AKJ05847.1
tolB protein precursor protein.
 
  
 0.864
AKJ02405.1
TPR repeat protein.
 
   
 0.829
AKJ02410.1
TPR domain protein, putative component of TonB system.
 
     0.802
AKJ04296.1
Putative abductin-like protein.
 
  
 0.798
AKJ07962.1
Adventurous gliding motility protein S.
 
  
 0.787
AKJ02411.1
Sporulation domain protein.
  
   
 0.781
AKJ00779.1
Cell division protein FtsK.
 
     0.777
AKJ05726.1
Hypothetical protein.
  
     0.775
AKJ05539.1
Putative lipoprotein.
  
     0.771
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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