Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AKJ02405.1TPR repeat protein. (480 aa)    
Predicted Functional Partners:
AKJ02404.1
TPR domain protein, putative component of TonB system.
 
   
 0.829
AKJ04918.1
TPR domain protein, putative component of TonB system.
  
   
 0.775
AKJ01984.1
TPR repeat protein.
  
 
   0.773
AKJ03134.1
Tetratricopeptide repeat protein.
 
 
   0.769
AKJ02757.1
TPR domain protein, putative component of TonB system.
  
     0.763
AKJ02704.1
Hypothetical protein.
 
     0.747
AKJ00320.1
TPR repeat protein.
  
     0.735
AKJ02837.1
TPR domain protein, putative component of TonB system.
 
 
 
 0.725
AKJ02628.1
TPR domain protein, putative component of TonB system.
  
     0.712
AKJ01931.1
TPR domain protein, putative component of TonB system.
  
     0.706
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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