STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02407.1FHA domain containing protein. (641 aa)    
Predicted Functional Partners:
AKJ02404.1
TPR domain protein, putative component of TonB system.
 
  
 0.868
AKJ07962.1
Adventurous gliding motility protein S.
 
 
 0.862
AKJ05036.1
Adventurous gliding motility protein S.
 
 
 0.844
AKJ02410.1
TPR domain protein, putative component of TonB system.
 
 
 0.828
AKJ04299.1
TPR domain protein, putative component of TonB system.
 
   0.794
AKJ05037.1
TolR-like protein.
 
 
 0.779
AKJ07626.1
Tryptophan synthase alpha chain.
  
    0.765
AKJ01577.1
TPR domain protein, putative component of TonB system.
 
  
 0.762
AKJ05726.1
Hypothetical protein.
  
     0.759
AKJ05725.1
General secretion pathway protein J.
  
     0.753
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.