STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02410.1TPR domain protein, putative component of TonB system. (4035 aa)    
Predicted Functional Partners:
AKJ02600.1
Cell division protein FtsK.
 
 0.866
AKJ02407.1
FHA domain containing protein.
 
 
 0.828
AKJ00687.1
Cell division protein FtsK.
  
  0.816
AKJ06279.1
Putative two-component system response regulator.
 
 
 0.810
AKJ04296.1
Putative abductin-like protein.
 
 
 0.803
AKJ02404.1
TPR domain protein, putative component of TonB system.
 
     0.802
AKJ07478.1
Hypothetical protein.
 
     0.800
AKJ01255.1
TolA protein.
 
 0.796
AKJ05049.1
OmpA domain protein.
 
 
 0.796
AKJ07642.1
Hypothetical protein.
 
 
   0.789
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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