STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02422.1Polyketide synthase. (530 aa)    
Predicted Functional Partners:
AKJ02423.1
Lipid A export ATP-binding/permease protein MsbA.
  
    0.716
AKJ02421.1
Hypothetical protein.
       0.675
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
 
  
 0.572
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
 
  
 0.552
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
 
  
 0.552
AKJ03340.1
Thioesterase type II.
  
     0.525
AKJ06069.1
Thioesterase.
  
     0.518
AKJ02884.1
Hypothetical protein.
  
    0.493
AKJ04230.1
Malonyl CoA-acyl carrier protein transacylase.
 
  
 0.487
AKJ02968.1
Transcriptional regulator, LuxR family protein.
  
     0.470
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.