STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02423.1Lipid A export ATP-binding/permease protein MsbA. (581 aa)    
Predicted Functional Partners:
AKJ02422.1
Polyketide synthase.
  
    0.716
AKJ02421.1
Hypothetical protein.
       0.621
AKI99003.1
Cell division protein FtsH; Belongs to the AAA ATPase family.
 
 0.589
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.587
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.587
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.587
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
  
 
 0.557
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
  
 0.532
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
 
 0.521
AKJ01689.1
Lipid A export ATP-binding/permease protein MsbA.
 
 
  
0.484
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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