STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02425.1Hypothetical protein. (648 aa)    
Predicted Functional Partners:
AKI98993.1
Putative DNA-binding regulatory protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.749
AKI99960.1
Putative fatty acid desaturase.
  
     0.731
AKI99912.1
Myosin heavy chain.
  
     0.729
AKJ00637.1
Acetyltransferase, GNAT family.
  
     0.724
AKJ00385.1
NHL repeat domain protein.
  
     0.699
AKJ01055.1
Putative lipoprotein.
  
    0.690
AKJ07823.1
Cna B domain protein.
  
     0.659
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.642
AKJ07753.1
Putative lipoprotein.
  
     0.641
AKJ02040.1
Putative lipoprotein.
  
    0.637
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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