Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02430.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
AKJ02429.1
Ribonucleotide reductase of class III; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
       0.773
AKJ02431.1
Hypothetical protein.
       0.773
AKJ02432.1
Hypothetical protein.
       0.773
AKJ02433.1
Hypothetical protein.
       0.746
AKJ02434.1
DNA helicase.
       0.746
AKJ02435.1
Hypothetical protein.
       0.746
AKJ02436.1
Hypothetical protein.
       0.746
AKJ02437.1
Hypothetical protein.
       0.488
AKJ02438.1
Hypothetical protein.
       0.408
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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