STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02438.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
AKJ02437.1
Hypothetical protein.
     
 0.668
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.633
AKJ07823.1
Cna B domain protein.
  
     0.607
AKI98681.1
Sulfur carrier protein adenylyltransferase ThiF.
  
   0.606
AKJ04376.1
Sulfur carrier protein adenylyltransferase ThiF.
  
   0.606
AKJ00611.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.529
AKJ04409.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.528
AKJ02436.1
Hypothetical protein.
     
 0.524
AKJ07742.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.519
AKJ02439.1
Serine/threonine protein kinase.
       0.504
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.