Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98713.1 | AKJ02452.1 | AA314_00340 | AA314_04078 | L-lactate dehydrogenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.918 |
AKI98713.1 | AKJ02453.1 | AA314_00340 | AA314_04079 | L-lactate dehydrogenase. | Transcriptional regulator, GntR family domain / Aspartate aminotransferase. | 0.953 |
AKI99294.1 | AKJ02452.1 | AA314_00921 | AA314_04078 | Phenylalanine-4-hydroxylase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.780 |
AKI99294.1 | AKJ07303.1 | AA314_00921 | AA314_08929 | Phenylalanine-4-hydroxylase. | Maleylacetoacetate isomerase. | 0.612 |
AKI99294.1 | AKJ07878.1 | AA314_00921 | AA314_09504 | Phenylalanine-4-hydroxylase. | Pterin-4-alpha-carbinolamine dehydratase. | 0.984 |
AKI99294.1 | hmgA | AA314_00921 | AA314_06243 | Phenylalanine-4-hydroxylase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.844 |
AKJ00700.1 | AKJ02452.1 | AA314_02326 | AA314_04078 | Acetyl-coenzyme A carboxyl transferase alpha chain. | 4-hydroxyphenylpyruvate dioxygenase. | 0.505 |
AKJ02452.1 | AKI98713.1 | AA314_04078 | AA314_00340 | 4-hydroxyphenylpyruvate dioxygenase. | L-lactate dehydrogenase. | 0.918 |
AKJ02452.1 | AKI99294.1 | AA314_04078 | AA314_00921 | 4-hydroxyphenylpyruvate dioxygenase. | Phenylalanine-4-hydroxylase. | 0.780 |
AKJ02452.1 | AKJ00700.1 | AA314_04078 | AA314_02326 | 4-hydroxyphenylpyruvate dioxygenase. | Acetyl-coenzyme A carboxyl transferase alpha chain. | 0.505 |
AKJ02452.1 | AKJ02453.1 | AA314_04078 | AA314_04079 | 4-hydroxyphenylpyruvate dioxygenase. | Transcriptional regulator, GntR family domain / Aspartate aminotransferase. | 0.905 |
AKJ02452.1 | AKJ02976.1 | AA314_04078 | AA314_04602 | 4-hydroxyphenylpyruvate dioxygenase. | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit. | 0.505 |
AKJ02452.1 | AKJ03836.1 | AA314_04078 | AA314_05462 | 4-hydroxyphenylpyruvate dioxygenase. | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit. | 0.505 |
AKJ02452.1 | AKJ06162.1 | AA314_04078 | AA314_07788 | 4-hydroxyphenylpyruvate dioxygenase. | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit. | 0.505 |
AKJ02452.1 | AKJ07303.1 | AA314_04078 | AA314_08929 | 4-hydroxyphenylpyruvate dioxygenase. | Maleylacetoacetate isomerase. | 0.711 |
AKJ02452.1 | AKJ07878.1 | AA314_04078 | AA314_09504 | 4-hydroxyphenylpyruvate dioxygenase. | Pterin-4-alpha-carbinolamine dehydratase. | 0.592 |
AKJ02452.1 | hmgA | AA314_04078 | AA314_06243 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.940 |
AKJ02453.1 | AKI98713.1 | AA314_04079 | AA314_00340 | Transcriptional regulator, GntR family domain / Aspartate aminotransferase. | L-lactate dehydrogenase. | 0.953 |
AKJ02453.1 | AKJ02452.1 | AA314_04079 | AA314_04078 | Transcriptional regulator, GntR family domain / Aspartate aminotransferase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.905 |
AKJ02976.1 | AKJ02452.1 | AA314_04602 | AA314_04078 | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit. | 4-hydroxyphenylpyruvate dioxygenase. | 0.505 |
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