STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02489.1ABC transporter ATP-binding protein. (157 aa)    
Predicted Functional Partners:
AKJ02488.1
Membrane protein.
 
 
 0.970
AKI98409.1
Membrane protein.
 
 
 0.876
AKI99972.1
Membrane protein.
 
 
 0.876
AKJ02490.1
Sensor histidine kinase.
       0.489
AKJ02486.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.452
AKJ02487.1
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
     
 0.452
AKJ04774.1
Pectin lyase like protein.
  
 
 0.450
AKJ03919.1
Gliding motility protein GldF.
  
 
 0.437
AKJ04187.1
Hypothetical protein.
  
   0.433
AKJ02396.1
Gliding motility protein GldF.
  
 
 0.432
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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