STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02495.1Peptidase, M23/M37 family. (216 aa)    
Predicted Functional Partners:
AKJ02496.1
Hypothetical protein.
       0.773
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.687
AKI99740.1
Hypothetical protein.
  
     0.685
AKJ07049.1
Hypothetical protein.
  
     0.671
AKJ07493.1
Cytochrome c family protein.
  
     0.652
AKJ07515.1
Microbial collagenase, secreted.
  
     0.628
AKJ00154.1
Hypothetical protein.
  
     0.616
AKJ03516.1
Hypothetical protein.
  
   
 0.613
AKJ01505.1
Hypothetical protein.
 
 
   0.603
AKJ06280.1
Signal recognition particle receptor protein FtsY.
 
     0.597
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.