STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02497.1Arabinan endo-1,5-alpha-L-arabinosidase. (616 aa)    
Predicted Functional Partners:
AKJ04818.1
Alpha-L-arabinofuranosidase II precursor.
 
   
 0.728
AKJ06144.1
Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.666
AKJ03350.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.665
AKJ03341.1
Hypothetical protein.
  
     0.645
AKJ06122.1
Hypothetical protein.
  
     0.623
AKJ01658.1
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
  
 0.554
AKJ01851.1
Beta-glucosidase.
 
   
 0.506
AKJ07094.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.493
AKJ07724.1
Beta-mannosidase.
 
     0.488
AKJ01212.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.442
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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