Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ02501.1Dienelactone hydrolase. (366 aa)    
Predicted Functional Partners:
AKJ02502.1
Arabinose efflux permease.
 
   
 0.902
AKJ04631.1
Hypothetical protein.
 
    0.801
AKJ04629.1
Transcriptional regulator.
 
    0.761
AKJ02503.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
    0.488
AKJ05398.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.482
AKJ08272.1
Hypothetical protein.
  
     0.475
AKJ06176.1
Hypothetical protein.
  
     0.471
AKJ00199.1
Protein-L-isoaspartate O-methyltransferase.
   
    0.451
AKJ05924.1
SdeA.
   
    0.451
AKJ05925.1
SdeA.
   
    0.451
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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